Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567359: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319733' containing sample 'VET1901R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.7M spots, 949.5M bases, 428.5Mb downloads

UUID: 7eaa298a-07f3-41fc-b244-831cdc479f12

Design: Illumina sequencing of Staphylococcus aureus VET1901R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228832 • SRP042805 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1901R

SAMN02404322 • SRS626873 • All experiments • All runs

Organism: Staphylococcus aureus VET1901R

Library:

Name: Pond-319733

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470787.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDGC

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55245

research_project: RP-513

root_sample_id: SM-4PO9G

sample_id: SM-5CDGC

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.7M spots, 949.5M bases, 428.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1329228	2,324,665	469.6M	212.2Mb	2014-06-03
SRR1344794	2,376,052	480M	216.3Mb	2014-06-06

ID:: 810176

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